CGL

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This is the Comparative Genomics Library by Mark Yandell and Chris Mungall and others[1]. It is an extension of BioPerl to do more explict comparative genomics, in particular comparing the change in gene structure or exon-intron patterns in genomes.

References

  1. Yandell M, Mungall CJ, Smith C, Prochnik S, Kaminker J, Hartzell G, Lewis S, and Rubin GM. Large-scale trends in the evolution of gene structures within 11 animal genomes. PLoS Comput Biol. 2006 Mar;2(3):e15. DOI:10.1371/journal.pcbi.0020015 | PubMed ID:16518452 | HubMed [yandell2006]
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