Gene prediction

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Gene prediction tools

Support for gene prediction tools are listed here. The Run package also lists the current wrapper modules for running gene prediction tools.

If you have additional tools that are requested, please add them to the list with a mention of WANTED.

Modules to parse Gene prediction results

The modules are named with the same name as the prediction program so hopefully it is clear. In addition variants are supported where possible (Fgenesh++ should be parseable with Fgenesh, GlimerHMM with Glimmer, etc).

Ab initio

Evidence based

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