Libsequence

libsequence [1] is an open-source C++-based library, developed by Kevin Thornton, used primarily for evolutionary genetic and genomic analyses. BioLib-based bindings are available and will be incorporated into BioPerl in a future release.

References

1. Thornton K. Libsequence: a C++ class library for evolutionary genetic analysis. Bioinformatics. 2003 Nov 22;19(17):2325-7.