Module:Bio::Search::HSP::GenericHSP
From BioPerl
| Bio::Search::HSP::GenericHSP | |
|---|---|
| PDoc | Bio::Search::HSP::GenericHSP |
| CPAN | Bio::Search::HSP::GenericHSP |
| metaCPAN | Bio::Search::HSP::GenericHSP |
This module provides a concrete implementation for the HSPI interface, see also Bio::Search::HSP::HSPI for the required methods. It is written around the basic data from BLAST HSPs. Specific functions for a particular data reperesented in only one type of Search result report have been added in several modules. See Bio::Search::HSP::FastaHSP, Bio::Search::HSP::BlastHSP, Bio::Search::HSP::HMMERHSP, Bio::Search::HSP::PSLHSP, Bio::Search::HSP::WABAHSP, and Bio::Search::HSP::PsiBlastHSP.
