Module:Bio::Search::HSP::GenericHSP

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Bio::Search::HSP::GenericHSP
PDoc Bio::Search::HSP::GenericHSP
CPAN Bio::Search::HSP::GenericHSP
metaCPAN Bio::Search::HSP::GenericHSP

This module provides a concrete implementation for the HSPI interface, see also Bio::Search::HSP::HSPI for the required methods. It is written around the basic data from BLAST HSPs. Specific functions for a particular data reperesented in only one type of Search result report have been added in several modules. See Bio::Search::HSP::FastaHSP, Bio::Search::HSP::BlastHSP, Bio::Search::HSP::HMMERHSP, Bio::Search::HSP::PSLHSP, Bio::Search::HSP::WABAHSP, and Bio::Search::HSP::PsiBlastHSP.

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