PROBCONS

Probabilistic Consistency-based Multiple Alignment of Amino Acid Sequences is available here. PROBCONS is an efficient protein multiple sequence alignment program, which has demonstrated a statistically significant improvement in accuracy compared to several leading alignment tools.

References

1. Do CB, Mahabhashyam MS, Brudno M, and Batzoglou S. ProbCons: Probabilistic consistency-based multiple sequence alignment. Genome Res. 2005 Feb;15(2):330-40. DOI:10.1101/gr.2821705 |